Projects & Collaborations
The Canadian Centre for Computational Genomics (C3G) leads and supports multiple large projects ranging from their development to deployment including software solutions, such as APIs and web applications, to facilitating the organization, discovery, visualization for both large-scale and small-scale projects.
Pan-Canadian Genome Library (PCGL)
Funded by the Canadian Institute for Health Research and led by a dream team of Canadian geneticists, the Pan-Canadian Genome Library (PCGL) is establishing the framework for Canada’s management and sharing of human genomic data.
GenPipes
GenPipes was developed at the C3G as a flexible Python-based framework that facilitates the development and deployment of multi-step workflows optimized for High-Performance Computing clusters and the cloud. GenPipes comes with 12 validated and scalable pipelines for various genomics applications, including: RNA-seq, WGS, WES, ChIP-Seq, and HiC.
SecureData4Health (SD4H)
SecureData4Health (SD4H) is a secure cloud infrastructure that allows researchers to store, access, share and analyze data at any scale, in a fully governed, highly secure environment, while maintaining control of their own data at all times. This project builds upon the successful HPC4Health secure cloud now used by researchers and clinicians at multiple Ontario hospitals. It is the product of a collaboration between the C3G and Calcul Quebec.
Click on a project logo to learn more.
Past Projects
